MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,515
rRNA: 7
tRNA: 54
tmRNA: 1
Total number of protein coding genes annotated/found:
2,448
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5043|JADGLK010000033.1
MBF0808749.1
Genome Viewer
NA
AA
471/157
1933-1463
thioredoxin-dependent thiol peroxidase
SEQF5043|JADGLK010000014.1
MBF0808015.1
Genome Viewer
NA
AA
1362/454
43168-41807
adenosylmethionine--8-amino-7-oxononanoate transaminase
SEQF5043|JADGLK010000004.1
MBF0807344.1
Genome Viewer
NA
AA
1239/413
33723-32485
biotin synthase BioB
SEQF5043|JADGLK010000014.1
MBF0808012.1
Genome Viewer
NA
AA
774/258
39489-38716
dethiobiotin synthase
SEQF5043|JADGLK010000004.1
MBF0807337.1
Genome Viewer
NA
AA
1338/446
27408-26071
branched-chain amino acid transport system II carrier protein
SEQF5043|JADGLK010000005.1
MBF0807422.1
Genome Viewer
NA
AA
753/251
22085-22837
acetolactate decarboxylase
SEQF5043|JADGLK010000011.1
MBF0807815.1
Genome Viewer
NA
AA
1164/388
2493-3656
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
SEQF5043|JADGLK010000011.1
MBF0807816.1
Genome Viewer
NA
AA
3306/1102
3669-6974
carbamoyl-phosphate synthase large subunit
SEQF5043|JADGLK010000023.1
MBF0808420.1
Genome Viewer
NA
AA
942/314
7175-6234
type I-E CRISPR-associated endonuclease Cas1
SEQF5043|JADGLK010000023.1
MBF0808419.1
Genome Viewer
NA
AA
366/122
6237-5872
type I-E CRISPR-associated endoribonuclease Cas2
SEQF5043|JADGLK010000023.1
MBF0808426.1
Genome Viewer
NA
AA
2889/963
14863-11975
CRISPR-associated helicase Cas3'
SEQF5043|JADGLK010000023.1
MBF0808422.1
Genome Viewer
NA
AA
693/231
8547-7855
type I-E CRISPR-associated protein Cas5/CasD
SEQF5043|JADGLK010000023.1
MBF0808421.1
Genome Viewer
NA
AA
687/229
7858-7172
type I-E CRISPR-associated protein Cas6/Cse3/CasE
SEQF5043|JADGLK010000023.1
MBF0808423.1
Genome Viewer
NA
AA
1119/373
9670-8552
type I-E CRISPR-associated protein Cas7/Cse4/CasC
SEQF5043|JADGLK010000023.1
MBF0808425.1
Genome Viewer
NA
AA
1659/553
11994-10336
type I-E CRISPR-associated protein Cse1/CasA
SEQF5043|JADGLK010000023.1
MBF0808424.1
Genome Viewer
NA
AA
633/211
10324-9692
type I-E CRISPR-associated protein Cse2/CasB
SEQF5043|JADGLK010000020.1
MBF0808311.1
Genome Viewer
NA
AA
1092/364
36678-37769
c-type cytochrome biogenesis protein CcsB
SEQF5043|JADGLK010000018.1
MBF0808195.1
Genome Viewer
NA
AA
2589/863
7123-9711
ATP-dependent chaperone ClpB
SEQF5043|JADGLK010000038.1
MBF0808883.1
Genome Viewer
NA
AA
315/105
9031-9345
ATP-dependent Clp protease adapter ClpS
SEQF5043|JADGLK010000002.1
MBF0807206.1
Genome Viewer
NA
AA
1284/428
89483-90766
ATP-dependent Clp protease ATP-binding subunit ClpX
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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